MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
19428wE1_BL01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 24
bases: 2,837,491 bps
CDS: 2,819
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,888
Total number of protein coding genes annotated/found:
2,819
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 141 pages
Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5031|JADGMG010000007.1
SEQF5031_02839
Genome Viewer
NA
AA
366/122
618-253
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02840
Genome Viewer
NA
AA
1350/450
726-2075
Arginine decarboxylase
SEQF5031|JADGMG010000007.1
SEQF5031_02841
Genome Viewer
NA
AA
621/207
2077-2697
Thymidylate kinase
SEQF5031|JADGMG010000007.1
SEQF5031_02842
Genome Viewer
NA
AA
330/110
2731-3060
Cyclic di-AMP receptor A
SEQF5031|JADGMG010000007.1
SEQF5031_02843
Genome Viewer
NA
AA
927/309
3113-4039
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02844
Genome Viewer
NA
AA
807/269
4044-4850
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02845
Genome Viewer
NA
AA
333/111
4865-5197
Initiation-control protein YabA
SEQF5031|JADGMG010000007.1
SEQF5031_02846
Genome Viewer
NA
AA
729/243
5248-5976
tRNA1(Val) (adenine(37)-N6)-methyltransferase
SEQF5031|JADGMG010000007.1
SEQF5031_02847
Genome Viewer
NA
AA
249/83
5969-6217
hypothetical protein
SEQF5031|JADGMG010000007.1
SEQF5031_02848
Genome Viewer
NA
AA
843/281
6219-7061
Ribosomal RNA small subunit methyltransferase I
SEQF5031|JADGMG010000007.1
SEQF5031_02849
Genome Viewer
NA
AA
276/92
7401-7126
Transition state regulatory protein AbrB
SEQF5031|JADGMG010000007.1
SEQF5031_02850
Genome Viewer
NA
AA
2001/667
7634-9634
Methionine--tRNA ligase
SEQF5031|JADGMG010000007.1
SEQF5031_02851
Genome Viewer
NA
AA
765/255
9656-10420
putative metal-dependent hydrolase YcfH
SEQF5031|JADGMG010000007.1
SEQF5031_02852
Genome Viewer
NA
AA
543/181
10475-11017
Ribonuclease M5
SEQF5031|JADGMG010000007.1
SEQF5031_02853
Genome Viewer
NA
AA
891/297
11022-11912
Ribosomal RNA small subunit methyltransferase A
SEQF5031|JADGMG010000007.1
SEQF5031_02854
Genome Viewer
NA
AA
264/88
12012-12275
Protein Veg
SEQF5031|JADGMG010000007.1
SEQF5031_02855
Genome Viewer
NA
AA
849/283
12424-13272
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SEQF5031|JADGMG010000007.1
SEQF5031_02856
Genome Viewer
NA
AA
825/275
13342-14166
Pur operon repressor
SEQF5031|JADGMG010000007.1
SEQF5031_02857
Genome Viewer
NA
AA
378/126
14183-14560
2-iminobutanoate/2-iminopropanoate deaminase
SEQF5031|JADGMG010000007.1
SEQF5031_02858
Genome Viewer
NA
AA
330/110
14617-14946
Putative septation protein SpoVG
Items 1 - 20
🡆
click arrow to navigate by page or
of 141 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
